DOWNLOAD Learning Material (上課講義)
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2011 |
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[2010/11/13] 2. |
基因集分析統計方法 Statistical Methods for Gene Set Analysis of Expression Data |
[2010/06/16] 1. |
Microarray Data Analysis: Gene Set Enrichment Analysis |
2010 |
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[2010/11/02] 2. |
具時間序列的微陣列實驗資料分析 |
[2010/04/08] 1. |
Microarray Data Analysis |
2009 |
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[2009/03/26] 1. |
Microarray Data Analysis |
2008 |
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[2008/12/22] 5. |
Statistical Microarray Data Analysis: Classification (66 pages, 1.65MB), Statistical Microarray Data Analysis: Dimension Reduction (47 pages, 1.45MB) 中央研究院,Advanced Statistics (C4), TIGP-BP |
[2008/12/15] 4. |
Statistical Microarray Data Analysis: Clustering (67 pages, 3.10MB), Biclustering Reference 中央研究院,Advanced Statistics (C4), TIGP-BP |
[2008/10/28] 3. |
Statistical Microarray Data Analysis (87 pages, 3.96MB) |
[2008/04/30] 2. |
Microarray Data Analysis [150 pages, 9.01MB] 國立陽明大學 臨床醫學研究所 Course:生物資訊學在醫學研究的應用 |
[2008/01/29] 1. |
Normalization Methods for Analysis of Affymetrix GeneChip Microarray [57pages, 4.29MB] 中央研究院 生命科學圖書館, 2008 年教育訓練課程 |
2007 |
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[2007/11/06] 6. |
Microarray Data Analysis: |
(0). Statistical Microarray Data Analysis (2 pages, 503KB) (1). Preprocessing for Affymetrix GeneChip Data (43 pages, 3.72MB) (2). Finding Differential Expressed Genes (59 pages, 3.04MB) (3). Clustering and Visualization (56 pages, 6.01MB) 國立臺灣大學 資訊所 Course: 生物資訊與計算分子生物學 [Midterm Exam] |
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[2007/08/17] 5. | Microarray Data Analysis |
Time Course Microarray Experiments [57pages, 6.34MB] 國立陽明大學 生物醫學資訊研究所, 96學年度暑期「生物資訊與系統生物學學分班」 Course: 系統生物學實驗 |
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[2007/08/15] 4. |
Microarray Data Analysis: |
Clustering and Visualization [61pages, 9.29MB] 國立陽明大學 生物醫學資訊研究所, 96學年度暑期「生物資訊與系統生物學學分班」 Course: 系統生物學實驗 |
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[2007/04/21] 3. Microarray Data Analysis: |
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Data Preprocessing for Affymetrix GeneChip (Simplified Version) [43pages, 3.72MB] |
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[2007/04/12] 2. Microarray Data Analysis: Finding Differential Expressed Genes (57pages, 2.741MB) | |
Case Demo using affylmGUI: http://bioinf.wehi.edu.au/affylmGUI/ 國立臺灣大學 資訊所, Course: 生物資訊之統計與計算方法 |
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[2007/03/29] 1. Microarray Data Analysis: Data Preprocessing for Affymetrix GeneChip Data | |
[Data Preprocessing for Affymetrix GeneChip Data](69pages, 5.77MB) [Gene Filtering, Missing Values Imputation](13pages, 680KB) 國立臺灣大學 資訊所, Course: 生物資訊之統計與計算方法 |
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2006 |
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[2006/11/07] 6. Microarray Data Analysis | |
(0). Statistical Microarray Data Analysis (2 pages, 433KB) (1). Data Preprocessing for Affymetrix GeneChip (39 pages, 3.86MB) (2). Finding Differential Expressed Genes (32 pages, 1.37MB) (3). Visualization, Clustering and Classification (33 pages, 3.48MB) (4). Gene Regulatory Networks: Bayesian Networks (24 pages, 1.29MB) 國立臺灣大學 資訊所 Course: 生物資訊與計算分子生物學 |
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[2006/07/21] 5. Microarray Data Analysis (III): Analysis for Time Course Microarray Experiments |
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[上課講義] [軟體下載: STEM | User Manual] [參考文獻] | |
[2006/07/19] 4. Microarray Data Analysis (II): Clustering & Visualization |
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[上課講義] [軟體下載: GAP | Tutorial] [參考文獻] [Homework, Data] [Homework 參考資料: Plots_Rcode, PCA&MDS_Rcode, Clustering_Rcode, testdata, link1] 國立陽明大學生物資訊研究所, 95學年度暑期「生物資訊與系統生物學學分班」[上課講義] Course: 系統生物學實驗 |
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[2006/05/25] 3. Microarray Data Analysis: |
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(1). Data Preprocessing for Affymetrix GeneChip (38 pages, 3.67MB) (2). Gene Filtering and Missing Values Imputation (12 pages, 801K) (3). Finding Differential Expressed Genes (32 pages, 1.37MB) (4). Visualization, Clustering and Classification (28 pages, 3.4MB) 國立中正大學 分子生物研究所, Course: 生物晶片及其生醫應用 |
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[2006/04/11] 2. Finding Differential Expressed Genes | |
[Gene Filtering, Missing Values Imputation, 0.8MB] [Finding Differential Expressed Genes, 1.6MB] 國立臺灣大學 資訊所, Course: 生物資訊之統計與計算方法 2006-04-11 Homework: [SAM & Limma, limmaGUI, affylmGUI, 0.9MB] |
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[2006/03/28] 1. Data Preprocessing for cDNA Microarray and Affymetrix GeneChip Data | |
[cDNA Microarray, 4.8MB] [Affymetrix GeneChip, 4.7MB] 國立臺灣大學 資訊所, Course: 生物資訊之統計與計算方法 2006-03-28 Homework: [Homework, 54KB] |
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2005 |
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[2005/12/06] 5. Microarray Data Analysis |
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PART-I: Microarray Data Analysis [5.4MB], PART-II: Finding Differentially Expressed Genes [2.4MB] 國立臺灣大學 資訊所 Course: 生物資訊與計算分子生物學 |
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[2005/09/21] 4. Statistical Analysis in GeneSpring GX |
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- Clustering and Characterizing Data [3.67MB] | |
[2005/09/20] 3. Statistical Analysis in GeneSpring GX | |
- Finding Differentially Expressed Genes [1.62MB] 中央研究院 分子生物研究所 Microarray Core [公告] Links: GeneSpring GX |Free Trial |Analysis Guides |Quickstart Guide |Tutorials |
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[2005/07/27] [2005/07/29] 2. Clustering & Visualization (I)(II) |
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陽明大學生物資訊研究所, Course: 2005 微陣列數據分析暑期課程 [本次課程網頁] |
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[2005/05/12] 1. Statistical Microarray Data Analysis [7.54MB] |
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國立中正大學 分子生物研究所, Course: 生物晶片及其生醫應用 Reference for Finding DE Genes |
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2004 |
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[2004/12/10] 7. Microarray Data Analysis (II): Experimental Design |
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中央研究院, Course: 2004基因體統計學術研習會 |
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[2004/12/10] 6. Microarray Data Analysis (I): Microarray Variability and Missing Values Imputation |
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中央研究院, Course: 2004基因體統計學術研習會 |
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[2004/10/19] 5. Microarray Data Analysis (2): Oligo Microarray (Affymetrix GeneChip) Preprocessing |
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中央研究院, Course: Life Science Library |
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[2004/07/27] 4. Microarray Data Analysis (1): cDNA preprocessing |
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中央研究院, Course: Life Science Library |
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[2004/04/28] 3. Microarray Data Analysis |
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國立臺灣師範大學, Course: 生物資訊學程-生物資訊學導論 |
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[2004/03/26] 2. Introduction to Oligo Microarray Data Analysis |
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國立臺灣大學 醫工所, Course: Bioinformatics 長庚大學 [2004/?/?] 國立臺灣大學醫院 精神科 [2004/?/?] |
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[2004/03/17] 1. Statistics with MATLAB (I): Tests and ANOVA: Finding Differential Expressed Genes in Microarray Data |
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長庚大學, Course: MATLAB程式設計在基因體醫學的應用 [Sample Data][Matlab Code]
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